7WMF
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.792, 102.521, 103.171 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.100 |
R-factor | 0.226 |
Rwork | 0.224 |
R-free | 0.26690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6l2q |
RMSD bond length | 0.002 |
RMSD bond angle | 1.143 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 5.700 | 2.140 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.142 | 0.126 | 0.545 |
Rmeas | 0.154 | 0.138 | 0.588 |
Rpim | 0.060 | 0.054 | 0.221 |
Number of reflections | 53470 | 2753 | 2620 |
<I/σ(I)> | 20.6 | ||
Completeness [%] | 99.2 | 99.4 | 98.3 |
Redundancy | 6.6 | 6.3 | 6.9 |
CC(1/2) | 0.958 | 0.968 | 0.932 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.28 M lithium acetate pH 7.0, 20% PEG 3350 |