7W81
Crystal structure of the heme-bound form of the linker-NEAT3 region of IsdH from Staphylococcus aureus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-17 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.910, 95.310, 99.440 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.430 - 1.800 |
R-factor | 0.187 |
Rwork | 0.185 |
R-free | 0.22610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vtm |
RMSD bond length | 0.016 |
RMSD bond angle | 2.015 |
Data reduction software | MOSFLM (7.0.9) |
Data scaling software | SCALA (3.3.21) |
Phasing software | MOLREP (11.2.5) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.430 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.082 | 0.454 |
Rpim | 0.036 | 0.217 |
Number of reflections | 43510 | 6048 |
<I/σ(I)> | 12.3 | 2.8 |
Completeness [%] | 97.6 | 94.8 |
Redundancy | 5.7 | |
CC(1/2) | 0.996 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 200mM potassium chloride, 20% PEG 3350 |