7VPN
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain in complex with Mn(II) and N-Oxalylglycine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 64 |
Unit cell lengths | 219.804, 219.804, 77.751 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.160 - 2.600 |
R-factor | 0.2196 |
Rwork | 0.217 |
R-free | 0.26620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nm6 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.640 |
High resolution limit [Å] | 2.600 | 7.050 | 2.600 |
Rmerge | 0.304 | 0.292 | 2.205 |
Rmeas | 0.319 | 0.306 | 2.305 |
Rpim | 0.094 | 0.091 | 0.668 |
Total number of observations | 757847 | ||
Number of reflections | 66088 | 3440 | 3274 |
<I/σ(I)> | 5 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 11.5 | 11.2 | 11.8 |
CC(1/2) | 0.940 | 0.415 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 20 mM Sodium formate, 10% PEG 8000 |