7VH4
Crystal structure of oligoribonuclease of Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-05-15 |
Detector | PSI JUNGFRAU 4M |
Wavelength(s) | 0.96863 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 100.574, 100.574, 147.831 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.630 - 2.300 |
R-factor | 0.1963 |
Rwork | 0.194 |
R-free | 0.24490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2igi |
RMSD bond length | 0.008 |
RMSD bond angle | 1.422 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.630 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.074 | 0.533 |
Rmeas | 0.086 | 0.615 |
Rpim | 0.043 | 0.299 |
Number of reflections | 34389 | 3274 |
<I/σ(I)> | 11.7 | 2.9 |
Completeness [%] | 99.8 | 98.6 |
Redundancy | 7.8 | 8 |
CC(1/2) | 0.980 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 20 mM Sodium HEPES, pH 7.5, 0.25 M Sodium acetate, 25 % v/v PEG-3350 |