7V9P
Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in intermediate state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-09 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 91.420, 66.630, 153.740 |
Unit cell angles | 90.00, 93.41, 90.00 |
Refinement procedure
Resolution | 31.060 - 1.800 |
R-factor | 0.1903 |
Rwork | 0.190 |
R-free | 0.21010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7v9n |
Data reduction software | xia2 |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.740 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.053 | 0.510 |
Rmeas | 0.057 | 0.601 |
Rpim | 0.022 | 0.308 |
Number of reflections | 328585 | 11286 |
<I/σ(I)> | 16.4 | |
Completeness [%] | 98.9 | 90.4 |
Redundancy | 6.1 | 3.6 |
CC(1/2) | 0.999 | 0.807 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291.15 | 0.2 M Sodium chloride, 0.1 M Tris ,pH 8.0, 20% w/v PEG 4000 |