Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7V8H

Crystal structure of LRR domain from Shigella flexneri IpaH1.4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9793
Spacegroup nameP 41 21 2
Unit cell lengths108.780, 108.780, 99.336
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution60.820 - 2.460
R-factor0.1962
Rwork0.194
R-free0.23210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5kh1
RMSD bond length0.011
RMSD bond angle1.255
Data reduction softwareXDS (built 20190606)
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]76.9192.498
High resolution limit [Å]2.4562.456
Rpim0.0670.518
Number of reflections211361091
<I/σ(I)>14.43.1
Completeness [%]99.8100
Redundancy24.625.4
CC(1/2)0.9980.810
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION42890.1 M sodium citrate (pH 4.0), 0.8 M (NH4)2SO4

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon