Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7V6K

Crystal structure of Sortase A from Streptococcus pyogenes in complex with ML346

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-29
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979
Spacegroup nameP 31 2 1
Unit cell lengths34.330, 34.330, 396.230
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.005 - 1.570
R-factor0.1918
Rwork0.190
R-free0.22300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3fn5
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (v1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.7301.610
High resolution limit [Å]1.5701.570
Rmerge0.067
Rmeas0.071
Rpim0.023
Number of reflections4018540001
<I/σ(I)>20.7
Completeness [%]99.8
Redundancy16.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2890.1 M Bis-Tris pH 5.5, 0.2 M Magnesium chloride hexahydrate, 25% (w/v) polyethylene glycol 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon