7UQ2
Vs.4 from T4 phage in complex with cGAMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0448 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 81.694, 81.694, 217.616 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.850 - 2.000 |
R-factor | 0.1836 |
Rwork | 0.183 |
R-free | 0.20610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold model |
RMSD bond length | 0.015 |
RMSD bond angle | 1.229 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmeas | 0.101 | |
Rpim | 0.026 | 0.346 |
Number of reflections | 49941 | 2436 |
<I/σ(I)> | 33.6 | 2.17 |
Completeness [%] | 98.2 | |
Redundancy | 14.4 | |
CC(1/2) | 0.984 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 7% PEG8000, 0.1 M imidazole, pH 6.3, 0.2 mM calcium acetate |