7UNB
Crystal structure of malaria transmission-blocking antigen Pfs48/45-6C variant in complex with human antibodies RUPA-117 and RUPA-47
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-07-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033190 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.669, 127.160, 132.706 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.430 - 2.180 |
R-factor | 0.1798 |
Rwork | 0.178 |
R-free | 0.22800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6GHG for RUPA-47; unpublished in-house structure for other components |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17.1-3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.430 | 2.210 |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.205 | 0.733 |
Rpim | 0.059 | 0.281 |
Number of reflections | 65804 | 2596 |
<I/σ(I)> | 8.7 | 1.5 |
Completeness [%] | 99.9 | 100 |
Redundancy | 12.6 | 7.8 |
CC(1/2) | 0.995 | 0.603 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2 M magnesium chloride, 25 % (w/v) polyethylene glycol 3350, and 0.1 M Tris |