7UJ9
Room-temperature X-ray structure of monomeric SARS-CoV-2 main protease catalytic domain (MPro1-199)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2021-11-22 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.341, 63.087, 121.349 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.700 - 2.250 |
R-factor | 0.2065 |
Rwork | 0.204 |
R-free | 0.25020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qcy |
RMSD bond length | 0.004 |
RMSD bond angle | 0.677 |
Data reduction software | CrysalisPro |
Data scaling software | CrysalisPro |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.340 | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.137 | 0.827 |
Number of reflections | 20094 | 2012 |
<I/σ(I)> | 11.05 | 0.99 |
Completeness [%] | 99.7 | 99.6 |
Redundancy | 7 | 7.1 |
CC(1/2) | 0.952 | 0.798 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 283 | 18-21% PEG3350, 0.1 M Bis-Tris pH 7.0 |