7UB4
The crystal structure of the K36A/K38A/K233A/K234A quadruple mutant of E. coli YGGS in complex with PLP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-16 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1.5406 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 124.814, 124.814, 83.090 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.443 - 2.400 |
R-factor | 0.2079 |
Rwork | 0.205 |
R-free | 0.25980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1w8g |
Data reduction software | CrysalisPro (41.64.69a) |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.443 | 28.440 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.056 | 0.015 | 0.339 |
Rmeas | 0.059 | 0.015 | 0.354 |
Rpim | 0.018 | 0.005 | 0.103 |
Total number of observations | 2814 | 15866 | |
Number of reflections | 13080 | 282 | 1360 |
<I/σ(I)> | 33.7 | 98.2 | 8.5 |
Completeness [%] | 99.5 | 96.8 | 100 |
Redundancy | 11.3 | 10 | 11.7 |
CC(1/2) | 0.999 | 1.000 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 293 | 0.1M Sodium citrate/citric acid, pH 4.0, 0.8M ammonium sulfate |