7U9D
Crystal Structure of Human Phosphatidylcholine Transfer Protein in Complex with PC(16:0/20:4)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 133.172, 133.172, 83.271 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.300 - 2.180 |
R-factor | 0.2179 |
Rwork | 0.217 |
R-free | 0.23760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ln1 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.280 |
High resolution limit [Å] | 2.180 | 4.740 | 2.200 |
Rmerge | 0.100 | 0.072 | 1.508 |
Rmeas | 0.102 | 0.074 | 1.543 |
Rpim | 0.021 | 0.016 | 0.326 |
Number of reflections | 19665 | 2095 | 1928 |
<I/σ(I)> | 10.1 | ||
Completeness [%] | 99.9 | 99.4 | 100 |
Redundancy | 24 | 22.6 | 20.9 |
CC(1/2) | 0.979 | 0.750 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 291 | 3.4-3.8 M sodium formate and 0.1 mM sodium acetate pH 5.7 |