7U63
Crystal Structure Anti-Oxycodone Antibody HY2-A12 Fab Complexed with Oxycodone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-09-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 1 |
Unit cell lengths | 67.624, 67.989, 85.623 |
Unit cell angles | 69.13, 67.60, 68.64 |
Refinement procedure
Resolution | 42.850 - 2.300 |
R-factor | 0.2285 |
Rwork | 0.226 |
R-free | 0.28220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tt1 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.280 |
High resolution limit [Å] | 2.240 | 6.080 | 2.240 |
Rmerge | 0.034 | 0.030 | 0.383 |
Rmeas | 0.049 | 0.042 | 0.542 |
Rpim | 0.034 | 0.030 | 0.383 |
Total number of observations | 103835 | ||
Number of reflections | 59023 | 2933 | 2898 |
<I/σ(I)> | 14.4 | ||
Completeness [%] | 97.4 | 97.1 | 96.6 |
Redundancy | 1.8 | 1.8 | 1.6 |
CC(1/2) | 0.997 | 0.716 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | Tris pH 8.5, 0.1M 20% PEG 3350 Isopropanol 20% |