7U38
Pixantrone tethered DNA duplex
Experimental procedure
| Experimental method | MAD |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-10-22 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.91840 |
| Spacegroup name | P 64 2 2 |
| Unit cell lengths | 95.921, 95.921, 73.118 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 27.710 - 2.490 |
| R-factor | 0.2462 |
| Rwork | 0.245 |
| R-free | 0.26180 |
| Structure solution method | SAD |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.381 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | AutoSol |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.580 |
| High resolution limit [Å] | 2.490 | 5.360 | 2.490 |
| Rmerge | 0.131 | 0.087 | 1.212 |
| Rmeas | 0.133 | 0.088 | 1.229 |
| Rpim | 0.022 | 0.014 | 0.198 |
| Total number of observations | 276573 | ||
| Number of reflections | 7367 | 835 | 710 |
| <I/σ(I)> | 3.9 | ||
| Completeness [%] | 99.9 | 100 | 100 |
| Redundancy | 37.5 | 36.4 | 37.9 |
| CC(1/2) | 0.999 | 0.917 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | Crystallized from drops containing 2.2 M ammonium sulfate, and 2.8% to 3.8% PEG-400, in 0.1 M HEPES sodium |






