7TY3
Crystal Structure of SETD2 Bound to an Indole-based Inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-31 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.092, 76.702, 75.461 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.130 - 2.300 |
R-factor | 0.2163 |
Rwork | 0.214 |
R-free | 0.26950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SETD2 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.405 |
Data reduction software | XDS |
Data scaling software | Aimless |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.130 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.824 | |
Number of reflections | 12603 | 899 |
<I/σ(I)> | 5.8 | |
Completeness [%] | 95.8 | |
Redundancy | 4.1 | |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Potassium thiocyanate, 0.1 M Tris pH 7.5, 18% w/v PEG 2000 MME |