7TVJ
Crystal Structure of Monobody Mb(SHP2PTP_13)/SHP2 PTP Domain Complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-03-05 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 48.460, 48.490, 102.070 |
Unit cell angles | 80.14, 77.53, 61.63 |
Refinement procedure
Resolution | 49.670 - 2.390 |
R-factor | 0.2306 |
Rwork | 0.229 |
R-free | 0.25880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 3ZM1 & 3K2M |
RMSD bond length | 0.002 |
RMSD bond angle | 0.535 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.670 | 2.480 |
High resolution limit [Å] | 2.390 | 2.390 |
Rmerge | 0.084 | 0.245 |
Rmeas | 0.118 | 0.347 |
Rpim | 0.084 | 0.245 |
Number of reflections | 29422 | 3038 |
<I/σ(I)> | 6.7 | 2.3 |
Completeness [%] | 93.3 | 92.1 |
Redundancy | 1.8 | 1.7 |
CC(1/2) | 0.974 | 0.531 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 292 | 0.1 M sodium citrate tribasic dihydrate, 2% Tascimate, 16% PEG3350 |