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7TU2

Structure of the L. blandensis dGTPase R37A mutant bound to Mn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 41 21 2
Unit cell lengths179.934, 179.934, 110.941
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.220 - 2.130
R-factor0.2046
Rwork0.204
R-free0.22590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3bg2
RMSD bond length0.008
RMSD bond angle1.021
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.250
High resolution limit [Å]2.1302.130
Rmerge0.1181.763
Rmeas0.1001.869
Number of reflections10201416196
<I/σ(I)>9.961.15
Completeness [%]99.799.1
Redundancy9.48.9
CC(1/2)0.9970.508
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293Crystal grown in 1ul:1ul drops of well solution (0.6M Sodium Potassium Tartrate, 0.2M Lithium Sulfate, 0.1M Bis-Tris pH 6.5) and 10mg/mL protein. Cryoprotected by soaking in well solution with 30% ethylene glycol and 10mM MnCl2 added

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PDB entries from 2024-05-15

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