7TTX
Crystal structure of potent neutralizing antibody 10-40 in complex with Sarbecovirus bat RaTG13 receptor-binding domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 110 |
Detector technology | PIXEL |
Collection date | 2021-07-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979110 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.174, 76.816, 117.626 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.320 - 2.800 |
R-factor | 0.2269 |
Rwork | 0.222 |
R-free | 0.32110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7sd5 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 117.630 | 117.630 | 2.800 |
High resolution limit [Å] | 2.670 | 8.850 | 2.670 |
Rmerge | 0.173 | 0.087 | 2.259 |
Rmeas | 0.180 | 0.091 | 2.361 |
Rpim | 0.050 | 0.026 | 0.669 |
Total number of observations | 249834 | 6799 | 28449 |
Number of reflections | 19519 | 614 | 2433 |
<I/σ(I)> | 8.8 | 25.1 | 0.9 |
Completeness [%] | 98.9 | 98.2 | 94.5 |
Redundancy | 12.8 | 11.1 | 11.7 |
CC(1/2) | 0.997 | 0.996 | 0.481 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 1 M lithium chloride, 30% w/v PEG6000, 0.1 M sodium acetate |