7TB7
Crystal structure of D179N KPC-2 beta-lactamase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-05 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.97933 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.040, 66.251, 72.441 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.790 - 0.990 |
R-factor | 0.1293 |
Rwork | 0.129 |
R-free | 0.14430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ov5 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.790 | 1.010 |
High resolution limit [Å] | 0.990 | 0.990 |
Rmerge | 0.032 | 0.211 |
Number of reflections | 120566 | 1705 |
<I/σ(I)> | 39.3 | 2.1 |
Completeness [%] | 87.2 | |
Redundancy | 10.6 | 1.3 |
CC(1/2) | 1.000 | 0.920 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 298 | 20% PEG 6000, 100 mM citrate pH 4.0, and 100 mM KSCN, 10 mM CdCl2 |