7T8M
Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 5/6
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-08-31 |
| Detector | RIGAKU HyPix-6000HE |
| Wavelength(s) | 1.54178 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 67.558, 99.665, 103.393 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 24.140 - 1.600 |
| R-factor | 0.1613 |
| Rwork | 0.161 |
| R-free | 0.19710 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7l0d |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.473 |
| Data reduction software | CrysalisPro |
| Data scaling software | CrysalisPro |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 24.140 | 1.657 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.050 | 0.451 |
| Rmeas | 0.055 | 0.543 |
| Rpim | 0.022 | 0.297 |
| Number of reflections | 85584 | 7267 |
| <I/σ(I)> | 22.08 | 2.51 |
| Completeness [%] | 92.4 | 79.46 |
| Redundancy | 5.5 | 3.1 |
| CC(1/2) | 0.999 | 0.813 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 293 | 10-20 % (w/v) PEG 3350, 0.20-0.30 M NaCl, and 0.1 M Bis-Tris methane pH 5.5 |






