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7T28

Structure of phage Bsp38 anti-Pycsar nuclease Apyc1 in apo state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]80
Detector technologyPIXEL
Collection date2021-10-19
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97918
Spacegroup nameP 32 2 1
Unit cell lengths82.485, 82.485, 76.098
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.260 - 2.680
R-factor0.3021
Rwork0.300
R-free0.31970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold2
RMSD bond length0.002
RMSD bond angle0.484
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareAutoSol
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.4202.830
High resolution limit [Å]2.6802.700
Rpim0.0710.732
Number of reflections85811129
<I/σ(I)>5.91.1
Completeness [%]100.0
Redundancy13.3
CC(1/2)0.9960.883
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.2 M lithium sulfate, 0.1 M Tris-HCl pH 7.5, 30% PEG-4000

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