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7SXQ

Plasmodium falciparum apicoplast DNA polymerase (exo-minus) without affinity tag

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-08
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 65
Unit cell lengths143.999, 143.999, 165.006
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.970 - 2.500
R-factor0.2013
Rwork0.201
R-free0.22450
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dku
RMSD bond length0.002
RMSD bond angle0.444
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.640
High resolution limit [Å]2.5002.500
Number of reflections666913368
<I/σ(I)>17.8
Completeness [%]100.0
Redundancy10.2
CC(1/2)0.9870.568
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277Equal parts of protein and precipitant solutions. Protein solution: 20 mg/mL protein, 20 mM Tris, pH 8.0, 500 mM NaCl, 10% glycerol and 5 mM imidazole. Precipitant solution: PEG 1000 30% (v/v), 100 mM sodium citrate tribasic dihydrate, pH 5.5, 400 mM NaCl

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