7SU8
DIHYDRONEOPTERIN ALDOLASE (DHNA) FROM YERSINIA PESTIS with alkylated Cys50 CO-CRYSTALLIZED with 7,8-dihydroneopterin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-31 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54 |
Spacegroup name | I 4 |
Unit cell lengths | 72.604, 72.604, 105.960 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.870 - 2.650 |
R-factor | 0.2109 |
Rwork | 0.205 |
R-free | 0.25790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ojo |
RMSD bond length | 0.006 |
RMSD bond angle | 0.942 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.700 |
High resolution limit [Å] | 2.650 | 7.190 | 2.650 |
Rmerge | 0.043 | 0.026 | 0.206 |
Rmeas | 0.050 | 0.031 | 0.252 |
Rpim | 0.025 | 0.016 | 0.141 |
Total number of observations | 25781 | ||
Number of reflections | 7332 | 350 | 370 |
<I/σ(I)> | 9.7 | ||
Completeness [%] | 91.8 | 85.2 | 90.7 |
Redundancy | 3.5 | 3.5 | 2.5 |
CC(1/2) | 0.999 | 0.943 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.05 - 0.1M BisTris, 0.1-0.2 M CaCl2, 0 - 0.1M NaCl, 43 - 49% MPD |