7SPM
Replication Initiator Protein REPE54 and cognate DNA sequence with terminal three prime phosphates chemically crosslinked (30 mg/mL EDC, 12 hours, 2 doses).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2021-04-16 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 110.817, 80.174, 74.723 |
Unit cell angles | 90.00, 122.90, 90.00 |
Refinement procedure
Resolution | 36.910 - 3.280 |
R-factor | 0.2037 |
Rwork | 0.201 |
R-free | 0.25300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rva |
RMSD bond length | 0.015 |
RMSD bond angle | 1.626 |
Data reduction software | XDS (Jan 31, 2020) |
Data scaling software | XSCALE (Jan 31, 2020) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.19.2_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.910 | 3.540 |
High resolution limit [Å] | 3.280 | 3.280 |
Rmerge | 0.119 | 0.691 |
Rmeas | 0.140 | 0.811 |
Rpim | 0.073 | 0.420 |
Number of reflections | 8468 | 1724 |
<I/σ(I)> | 5.4 | 1.4 |
Completeness [%] | 99.3 | 99.1 |
Redundancy | 3.7 | 3.7 |
CC(1/2) | 0.998 | 0.930 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 70 mM MgCl2, 5% PEG 400, and 220 mM Tris HCl pH 8.0. |