7SEC
Crystal structure of human Fibrillarin in complex with compound 1a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-28 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 68.384, 68.874, 136.436 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.300 - 1.900 |
R-factor | 0.2246 |
Rwork | 0.223 |
R-free | 0.26630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ipx |
RMSD bond length | 0.012 |
RMSD bond angle | 1.131 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.530 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.078 | 1.078 |
Rmeas | 0.088 | 1.210 |
Rpim | 0.034 | 0.540 |
Number of reflections | 51310 | 3233 |
<I/σ(I)> | 7 | 1.5 |
Completeness [%] | 99.5 | |
Redundancy | 4.6 | |
CC(1/2) | 0.999 | 0.894 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 2.75-3.3 M Sodium Formate |