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7S0Y

Structures of TcdB in complex with Cdc42

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-12
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameC 2 2 21
Unit cell lengths122.354, 140.948, 111.803
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution92.400 - 2.790
R-factor0.21666
Rwork0.214
R-free0.25924
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bvm
RMSD bond length0.004
RMSD bond angle1.310
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]111.8002.940
High resolution limit [Å]2.7902.790
Rmerge0.063
Number of reflections244333527
<I/σ(I)>16.92.9
Completeness [%]100.0
Redundancy6.7
CC(1/2)0.9990.865
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M sodium cacodylate (pH 6.6), 2.4 M ammonium sulfate, and 2.5% (v/v) Jeffamine M-600 (pH 7.0)

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