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7S01

X-ray structure of the phage AR9 non-virion RNA polymerase holoenzyme in complex with a forked oligonucleotide containing the P077 promoter

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-13
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.91840
Spacegroup nameC 1 2 1
Unit cell lengths176.925, 110.455, 222.379
Unit cell angles90.00, 98.52, 90.00
Refinement procedure
Resolution49.350 - 3.400
R-factor0.2415
Rwork0.239
R-free0.29260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)EMD-24763
RMSD bond length0.002
RMSD bond angle0.469
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0003.8303.580
High resolution limit [Å]3.3803.5803.380
Rmeas0.1570.6141.013
Number of reflections5974589769572
<I/σ(I)>7.942.11.2
Completeness [%]94.09783.9
Redundancy2.882.992.58
CC(1/2)0.9930.8480.664
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52931.5 ul aliquot of the AR9 nvRNAP promoter complex (10 mg/mL) was mixed with the same volume of a solution containing 150 mM MIB pH 5, 150 mM LiCl, 13 % PEG 1500 and incubated as a hanging drop over the same solution.

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