7S01
X-ray structure of the phage AR9 non-virion RNA polymerase holoenzyme in complex with a forked oligonucleotide containing the P077 promoter
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-06-13 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.91840 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 176.925, 110.455, 222.379 |
| Unit cell angles | 90.00, 98.52, 90.00 |
Refinement procedure
| Resolution | 49.350 - 3.400 |
| R-factor | 0.242 |
| Rwork | 0.239 |
| R-free | 0.29300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | EMD-24763 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.469 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 3.580 |
| High resolution limit [Å] | 3.380 | 3.380 |
| Number of reflections | 59745 | |
| <I/σ(I)> | 7.94 | 1.2 |
| Completeness [%] | 94.0 | 83.9 |
| Redundancy | 2.88 | 2.58 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 1.5 ul aliquot of the AR9 nvRNAP promoter complex (10 mg/mL) was mixed with the same volume of a solution containing 150 mM MIB pH 5, 150 mM LiCl, 13 % PEG 1500 and incubated as a hanging drop over the same solution. |






