7RV4
Crystal structure of the BCL6 BTB domain in complex with OICR-9153
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-11-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 30.702, 72.781, 55.514 |
Unit cell angles | 90.00, 106.38, 90.00 |
Refinement procedure
Resolution | 30.050 - 1.250 |
R-factor | 0.1204 |
Rwork | 0.119 |
R-free | 0.14740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | IR29 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.261 | 53.261 | 1.320 |
High resolution limit [Å] | 1.250 | 3.950 | 1.250 |
Rmerge | 0.028 | 0.492 | |
Rmeas | 0.052 | 0.036 | 0.606 |
Rpim | 0.024 | 0.017 | 0.290 |
Number of reflections | 31926 | 1021 | 4602 |
<I/σ(I)> | 16.2 | 19.7 | 1.5 |
Completeness [%] | 99.0 | 97.8 | 98 |
Redundancy | 4.3 | 4.1 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 292 | Cocrystal with 1.2M Ammonium Sulfate, Na. Aceteate pH5. Shifted to 1.5 M Ammonium sulfate 0.1M Hepes 7.4, 20% glycerol prior to paratone and freezing. |