7RPD
X-ray crystal structure of OXA-24/40 V130D in complex with ertapenem
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.1272 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 102.696, 102.696, 85.803 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.620 - 1.950 |
R-factor | 0.1899 |
Rwork | 0.188 |
R-free | 0.22300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pae |
RMSD bond length | 0.010 |
RMSD bond angle | 1.802 |
Data reduction software | AutoProcess |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 102.696 | 1.955 |
High resolution limit [Å] | 1.948 | 1.948 |
Rmerge | 0.088 | 0.909 |
Rmeas | 0.095 | 0.979 |
Rpim | 0.034 | 0.359 |
Total number of observations | 247955 | |
Number of reflections | 33705 | 339 |
<I/σ(I)> | 12.3 | |
Completeness [%] | 98.7 | 98.5 |
Redundancy | 7.4 | 7.4 |
CC(1/2) | 0.997 | 0.817 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 0.1 M TRIS HCL, 2.0 M ammonium sulfate |