7RJZ
BthTX-II variant a, from Bothrops jararacussu venom, complexed with benzoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2014-05-01 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.0781 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 60.400, 107.370, 44.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 1.700 |
R-factor | 0.1907 |
Rwork | 0.189 |
R-free | 0.22220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oqd |
RMSD bond length | 0.003 |
RMSD bond angle | 0.650 |
Data reduction software | XDS (20210323) |
Data scaling software | XDS |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.130 | 1.800 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmeas | 0.091 | 1.205 |
Number of reflections | 57103 | 6582 |
<I/σ(I)> | 11.9 | |
Completeness [%] | 92.9 | 66.7 |
Redundancy | 3.7 | 3.15 |
CC(1/2) | 0.998 | 0.503 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 291 | 0.1 M sodium citrate pH 5.2, 25% PEG4000 (w/v), 0.21 M ammonium sulphate |