7R9V
Structure of PIK3CA with covalent inhibitor 19
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.060, 134.620, 144.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.260 - 2.690 |
R-factor | 0.2546 |
Rwork | 0.253 |
R-free | 0.29190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tuu |
RMSD bond length | 0.002 |
RMSD bond angle | 0.455 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.260 | 2.786 |
High resolution limit [Å] | 2.690 | 2.690 |
Rmerge | 0.070 | 2.373 |
Rmeas | 0.076 | |
Rpim | 0.030 | 1.010 |
Number of reflections | 32779 | 3221 |
<I/σ(I)> | 16.49 | 0.96 |
Completeness [%] | 99.7 | 99.47 |
Redundancy | 6.5 | 6.4 |
CC(1/2) | 0.999 | 0.465 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | PEG6000 8%, 0.6 M sodium formate, 0.1 M CHES pH 9.4, 5 mM TCEP |