7R9P
Crystal structure of HPK1 in complex with compound 14
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2015-06-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979500 |
Spacegroup name | P 1 |
Unit cell lengths | 53.258, 57.105, 61.646 |
Unit cell angles | 85.77, 85.38, 67.65 |
Refinement procedure
Resolution | 39.120 - 2.270 |
R-factor | 0.2108 |
Rwork | 0.210 |
R-free | 0.23210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6cqd |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1-4122_final) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.530 | 45.530 | 2.390 |
High resolution limit [Å] | 2.270 | 7.180 | 2.270 |
Rmerge | 0.058 | 0.019 | 0.508 |
Rmeas | 0.068 | 0.023 | 0.588 |
Rpim | 0.034 | 0.012 | 0.296 |
Total number of observations | 106277 | 3301 | 15298 |
Number of reflections | 27431 | 868 | 3943 |
<I/σ(I)> | 14.3 | 45.3 | 2.5 |
Completeness [%] | 88.8 | 88.7 | 87.3 |
Redundancy | 3.9 | 3.8 | 3.9 |
CC(1/2) | 0.999 | 0.999 | 0.852 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.1 M HEPES pH 7.5 and 12% PEG 8000 |