7R8Y
Ancestral protein AncThEn of Phosphomethylpyrimidine kinases family
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | LNLS BEAMLINE W01B-MX2 |
| Synchrotron site | LNLS |
| Beamline | W01B-MX2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-06-05 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.45867 |
| Spacegroup name | P 42 21 2 |
| Unit cell lengths | 113.316, 113.316, 112.233 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.960 - 3.200 |
| R-factor | 0.2332 |
| Rwork | 0.232 |
| R-free | 0.25390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1jxh |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.975 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.960 | 3.314 |
| High resolution limit [Å] | 3.200 | 3.200 |
| Rmerge | 0.410 | 3.331 |
| Rmeas | 0.418 | 3.394 |
| Rpim | 0.081 | 0.645 |
| Number of reflections | 12568 | 1223 |
| <I/σ(I)> | 10.88 | 1.27 |
| Completeness [%] | 99.8 | 99.92 |
| Redundancy | 25.8 | 27.3 |
| CC(1/2) | 0.996 | 0.544 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 292 | Protein condition: Protein 20 mg/mL, HMP 1 mM, ADP 1 mM, HEPES 50 mM pH 8.0, NaCl 150 mM and 2-mercaptoethanol 5 mM Reservoir condition: 2-Propanol 14% v/v, Calcium chloride dihydrate 0.14 M, Sodium acetate 0.07 M, Glycerol 30% v/v. |






