7R4N
Structure of human hydroxyacid oxidase 1 bound with 5-bromo-N-methyl-1H-indazole-3-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91587 |
Spacegroup name | I 4 |
Unit cell lengths | 97.000, 97.000, 80.640 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 62.090 - 1.700 |
R-factor | 0.1638 |
Rwork | 0.162 |
R-free | 0.19380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6gmb |
RMSD bond length | 0.015 |
RMSD bond angle | 1.796 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.090 | 62.010 | 1.500 |
High resolution limit [Å] | 1.460 | 6.530 | 1.460 |
Rmerge | 0.058 | 0.022 | 1.049 |
Rmeas | 0.063 | 0.025 | 1.213 |
Rpim | 0.025 | 0.010 | 0.600 |
Number of reflections | 64629 | 759 | 4781 |
<I/σ(I)> | 14.5 | ||
Completeness [%] | 99.9 | 99.9 | 99.7 |
Redundancy | 5.9 | 6.3 | 4 |
CC(1/2) | 0.999 | 0.999 | 0.584 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1 M MIB pH 7; 30% PEG1000 |