7R2I
Human Cyclophilin D in complex with fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-06 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9660 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 56.837, 56.837, 87.426 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.190 - 1.310 |
R-factor | 0.1415 |
Rwork | 0.140 |
R-free | 0.17920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7r2h |
RMSD bond length | 0.007 |
RMSD bond angle | 1.016 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.190 | 1.360 |
High resolution limit [Å] | 1.310 | 1.310 |
Number of reflections | 34782 | 3351 |
<I/σ(I)> | 10.62 | |
Completeness [%] | 99.6 | |
Redundancy | 6.8 | |
CC(1/2) | 0.998 | 0.546 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277.15 | 15 % PEG 3350, 0.1M K2HPO4 |