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7QXM

Crystal structure of the Vibrio cholerae replicative helicase (DnaB)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-21
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97857
Spacegroup nameP 21 21 21
Unit cell lengths141.230, 150.099, 188.264
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.630 - 3.800
R-factor0.2659
Rwork0.266
R-free0.27360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6t66
RMSD bond length0.004
RMSD bond angle0.610
Data reduction softwareXDS (Mar 15, 2019)
Data scaling softwareXSCALE (Mar 15, 2019)
Phasing softwareMOLREP (Vers 11.7.01)
Refinement softwareBUSTER (2.10.3 (20-MAY-2020))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]32.63032.6303.900
High resolution limit [Å]3.80016.9903.800
Rmerge0.4080.0773.583
Rmeas0.4240.0813.719
Total number of observations551596
Number of reflections400844962925
<I/σ(I)>4.8424.530.27
Completeness [%]99.994.8100
Redundancy13.76111.58113.967
CC(1/2)0.9950.9980.241
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62910.1M Sodium Acetate 1.2M Sodium Malonate

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PDB entries from 2024-05-15

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