7QRA
Crystal structure of CK1 delta in complex with VN725
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 |
Unit cell lengths | 49.208, 84.949, 90.070 |
Unit cell angles | 70.84, 74.08, 86.93 |
Refinement procedure
Resolution | 49.740 - 2.400 |
R-factor | 0.2406 |
Rwork | 0.238 |
R-free | 0.28160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ru8 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.107 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.740 | 49.740 | 2.530 |
High resolution limit [Å] | 2.400 | 7.590 | 2.400 |
Rmerge | 0.122 | 0.051 | 0.376 |
Rmeas | 0.172 | 0.062 | 0.539 |
Rpim | 0.097 | 0.033 | 0.307 |
Number of reflections | 48143 | 1599 | 7346 |
<I/σ(I)> | 5.9 | 2.2 | |
Completeness [%] | 92.9 | 97.4 | 96.6 |
Redundancy | 2.9 | 3.2 | 2.8 |
CC(1/2) | 0.984 | 0.997 | 0.845 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 20% PEG 3350, 0.1M sodium sulfate, 0.1M citrate 5.0 |