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7QJU

EED in complex with PRC2 allosteric inhibitor compound 7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2014-03-19
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.000
Spacegroup nameP 21 21 2
Unit cell lengths93.209, 178.187, 50.493
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.580 - 1.800
R-factor0.188
Rwork0.187
R-free0.21310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5h19
RMSD bond length0.008
RMSD bond angle0.960
Data reduction softwareautoPROC
Data scaling softwareSTARANISO (0.7.7)
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.8)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.58048.5801.852
High resolution limit [Å]1.8005.2841.800
Rmerge0.1010.0400.905
Rmeas0.1100.0440.987
Rpim0.0420.0170.390
Total number of observations4482842205821072
Number of reflections6761733813381
<I/σ(I)>12.5535.471.89
Completeness [%]95.199.898.1
Completeness (spherical) [%]85.799.853.3
Completeness (ellipsoidal) [%]95.199.898.1
Redundancy6.636.526.23
CC(1/2)0.9990.9990.714
Anomalous completeness (spherical)85.2100.053.3
Anomalous completeness94.8100.097.9
Anomalous redundancy3.53.73.2
CC(ano)-0.011-0.027-0.019
|DANO|/σ(DANO)0.70.90.7
Diffraction limitsPrincipal axes of ellipsoid fitted to diffraction cut-off surface
2.095 Å1.000, 1.000, 1.000
1.759 Å0.000, 0.000, 0.000
1.722 Å0.000, 0.000, 0.000
Criteria used in determination of diffraction limitslocal <I/sigmaI> ≥ 1.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M Tris pH 8.0, 16% PEG 8000

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PDB entries from 2024-05-15

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