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7QEH

LTA-binding domain of SlpA, the S-layer protein from Lactobacillus amylovorus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-03-01
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9789
Spacegroup nameP 21 21 21
Unit cell lengths30.561, 43.481, 89.107
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.080 - 1.670
R-factor0.1655
Rwork0.163
R-free0.19040
Structure solution methodSAD
RMSD bond length0.009
RMSD bond angle0.998
Data reduction softwareXDS
Phasing softwareSHELXCD
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.0801.734
High resolution limit [Å]1.6701.670
Rmerge0.1090.860
Rmeas0.114
Rpim0.0320.316
Number of reflections261861361
<I/σ(I)>19.843.2
Completeness [%]99.4
Redundancy12.2
CC(1/2)0.9990.805
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Morpheus screen condition #2-29 (20 mM of each carboxylic acid (sodium formate, ammonium acetate, sodium citrate tribasic dehydrate, sodium potassium tartrate tetrahydrate, and sodium oxamate), 0.1 M sodium HEPES- MOPS pH 7.5 with 20 % v/v PEG 500 MME and 10 % w/v PEG 20000). A protein stock solution of 20 mg/mL in 10 mM HEPES pH 7 and 100 mM NaCl was used. 1uL drop with 1:1 ration protein to reservoir solution.

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PDB entries from 2024-05-15

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