7Q8Z
Crystal structure of TTBK2 in complex with VNG1.33 (compound 27)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-18 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.905, 114.745, 120.576 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.560 - 1.570 |
R-factor | 0.1763 |
Rwork | 0.175 |
R-free | 0.20330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6u0k |
RMSD bond length | 0.015 |
RMSD bond angle | 1.566 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.390 | 46.390 | 1.610 |
High resolution limit [Å] | 1.570 | 7.020 | 1.570 |
Rmerge | 0.083 | 0.045 | 0.890 |
Rmeas | 0.092 | 0.048 | 0.986 |
Rpim | 0.029 | 0.015 | 0.292 |
Number of reflections | 106725 | 1378 | 7721 |
<I/σ(I)> | 15.7 | 2.4 | |
Completeness [%] | 98.2 | 99.7 | 97.4 |
Redundancy | 10.3 | 9.5 | 11.1 |
CC(1/2) | 0.998 | 0.999 | 0.788 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 1.6M Na/K phosphate pH 7, 5% Glycerol, 0.1M tris 8.5 |