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7Q6V

Crystal structure of the bromodomain of ATAD2 with triazolopyridine (cpd 14)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+
Temperature [K]100
Detector technologyCCD
Collection date2015-07-07
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5406
Spacegroup nameP 65 2 2
Unit cell lengths79.124, 79.124, 137.997
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.620 - 1.960
R-factor0.1881
Rwork0.187
R-free0.20570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)internal model
RMSD bond length0.010
RMSD bond angle0.900
Data scaling softwareAimless (0.4.8)
Phasing softwareAMoRE
Refinement softwareBUSTER (2.11.6)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.62048.6202.100
High resolution limit [Å]1.9605.5501.960
Rmerge0.0650.0250.411
Rmeas0.0710.0280.489
Rpim0.0300.0120.258
Total number of observations10067251069732
Number of reflections185799273056
<I/σ(I)>19.453.93
Completeness [%]98.097.291.1
Redundancy5.45.53.2
CC(1/2)0.9990.9990.785
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.25293ATAD2 (981-1108) at 12 mg/ml in 25 mM Tris pH 9.7, 300 mM NaCl, 0.5 mM TCEP crystallised from 20% PEG 3350, 0.2 M ammonium sulfate, 0.1 M Bis-Tris pH 6.25. Ligands were introduced by soaking, cryo-protection with 20 % glycerol.

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