7Q1Y
X-ray structure of human A2ML1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9793 |
Spacegroup name | H 3 2 |
Unit cell lengths | 320.150, 320.150, 321.940 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.370 - 4.400 |
R-factor | 0.2397 |
Rwork | 0.238 |
R-free | 0.27640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | densities from EM map |
RMSD bond length | 0.007 |
RMSD bond angle | 0.881 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 211.000 | 4.380 |
High resolution limit [Å] | 4.276 | 4.276 |
Rmerge | 0.301 | |
Number of reflections | 43680 | 2976 |
<I/σ(I)> | 8.75 | |
Completeness [%] | 99.4 | 93.3 |
Redundancy | 58.7 | |
CC(1/2) | 0.998 | 0.261 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M Potassium phosphate dibasic, 10 % PEG 3350 pH 9.2 |