7Q02
Zn-free structure of lipocalin-like Milk protein, inspired from Diploptera punctata, expressed in Saccharomyces cerevisiae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.362, 47.692, 97.612 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.810 - 1.450 |
R-factor | 0.1519 |
Rwork | 0.150 |
R-free | 0.19450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nyq |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.810 | 48.810 | 1.480 |
High resolution limit [Å] | 1.450 | 7.810 | 1.450 |
Rmerge | 0.107 | 0.052 | 0.771 |
Rmeas | 0.117 | 0.058 | 0.853 |
Rpim | 0.046 | 0.025 | 0.359 |
Total number of observations | 180115 | 1243 | 7746 |
Number of reflections | 28438 | 236 | 1407 |
<I/σ(I)> | 10.7 | 25.1 | 2.1 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 6.3 | 5.3 | 5.5 |
CC(1/2) | 0.997 | 0.998 | 0.758 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 290 | 0.1 M Sodium Acetate, HCl, pH 4.5; 25 % (w/v) PEG 3350 |