7PV5
RBD domain of D. melanogaster tRNA (uracil-5-)-methyltransferase homolog A (TRMT2A)
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0366445605250807 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.410, 41.890, 48.820 |
Unit cell angles | 90.00, 110.80, 90.00 |
Refinement procedure
Resolution | 45.640 - 1.600 |
R-factor | 0.1436 |
Rwork | 0.141 |
R-free | 0.19930 |
Structure solution method | SAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.936 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | Auto-Rickshaw |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.640 |
High resolution limit [Å] | 1.600 | 1.600 |
Number of reflections | 23209 | 1684 |
<I/σ(I)> | 11.63 | 3.51 |
Completeness [%] | 99.7 | |
Redundancy | 6.5 | |
CC(1/2) | 0.998 | 0.911 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 2M AmSO4 and 2M NaCl |