7PPB
2.4 angstrom crystal structure of bone morphogenetic protein receptor type II (BMPRII) extracellular domain in complex with BMP10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-23 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97950 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 119.589, 46.343, 43.753 |
Unit cell angles | 90.00, 110.57, 90.00 |
Refinement procedure
Resolution | 42.820 - 2.400 |
R-factor | 0.2076 |
Rwork | 0.206 |
R-free | 0.23470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ppa |
RMSD bond length | 0.002 |
RMSD bond angle | 0.618 |
Data reduction software | autoPROC |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.820 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.217 | 1.048 |
Rmeas | 0.234 | 1.284 |
Rpim | 0.089 | 0.508 |
Number of reflections | 8820 | 887 |
<I/σ(I)> | 6.7 | 1.5 |
Completeness [%] | 99.0 | 96.3 |
Redundancy | 6.9 | 6.1 |
CC(1/2) | 0.993 | 0.745 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 294.15 | 14% PEG 3350 0.14 M KCl |