7PKI
Crystal structure of human ACE2 bound to the spike receptor-binding domain from a cave bat sarbecovirus closely related to SARS-CoV-2.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-07-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 341.535, 341.535, 68.153 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.296 - 2.942 |
R-factor | 0.21501689136 |
Rwork | 0.214 |
R-free | 0.22720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6m0j |
RMSD bond length | 0.005 |
RMSD bond angle | 0.880 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | autoBUSTER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.630 | 3.047 |
High resolution limit [Å] | 2.942 | 2.942 |
Rmerge | 0.050 | 4.562 |
Number of reflections | 43645 | 614 |
<I/σ(I)> | 11.42 | |
Completeness [%] | 87.0 | |
Redundancy | 2 | |
CC(1/2) | 0.996 | 0.496 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277.15 | 0.2 M Lithium sulfate, 0.1 M Tris 8.5, 30 % w/v PEG 4000 |