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7PID

Protein kinase A catalytic subunit in complex with PKI5-24 and EN060

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2021-04-21
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)1.033193
Spacegroup nameP 21 21 21
Unit cell lengths58.703, 73.059, 109.498
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.761 - 1.496
R-factor0.133838625045
Rwork0.132
R-free0.16138
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5m6y
RMSD bond length0.008
RMSD bond angle0.995
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.7611.580
High resolution limit [Å]1.4961.496
Number of reflections7696612087
<I/σ(I)>27.225.86
Completeness [%]99.697.8
Redundancy13.0813
CC(1/2)0.9990.956
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277.15Protein at 8 mg/mL in 100 mM Mes-Bis-Tris pH 6.9, 75 mM Lithium chloride, 1 mM DTT, 100 mM Sodium-EDTA. Master-Mix: 540 uL of protein + 15 uL 10 mM Mega8 in Water + 45 uL 10 mM PKI5-24 in protein-buffer. 70 % Master-Mix mixed with 30 % 50 mM ligand in DMSO before setting of drops. 15-24 % Methanol/Water in Reservoir.

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PDB entries from 2024-05-15

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