Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7P8H

chicken GRIFIN bound to blood group tetrasaccharide B (type 1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9792
Spacegroup nameP 2 21 21
Unit cell lengths39.104, 70.554, 87.710
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.850 - 1.130
R-factor0.1546
Rwork0.153
R-free0.17600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5nmj
RMSD bond length0.008
RMSD bond angle1.089
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.8501.170
High resolution limit [Å]1.1301.130
Rmerge0.0150.305
Rmeas0.0210.431
Number of reflections908578884
<I/σ(I)>222
Completeness [%]99.1
Redundancy2
CC(1/2)0.9000.900
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29515 % w/v Polyethylene glycol 400; 100 mM MES pH 6.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon