Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7P59

Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) with two O-linked post-translational modifications

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-16
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.0
Spacegroup nameI 21 3
Unit cell lengths129.155, 129.155, 129.155
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.660 - 1.270
R-factor0.1758
Rwork0.175
R-free0.19590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6elc
Data reduction softwarexia2
Data scaling softwarepointless
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.6601.318
High resolution limit [Å]1.2701.270
Rmerge0.0892.497
Rmeas0.0922.565
Rpim0.0200.585
Number of reflections932859281
<I/σ(I)>21.271.28
Completeness [%]99.999.66
Redundancy19.919.1
CC(1/2)1.0000.513
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29521% PEG 3350, 250mM NaCl, 100mM Tris, pH 8.2

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon