7P59
Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) with two O-linked post-translational modifications
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-16 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | I 21 3 |
Unit cell lengths | 129.155, 129.155, 129.155 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.660 - 1.270 |
R-factor | 0.1758 |
Rwork | 0.175 |
R-free | 0.19590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6elc |
Data reduction software | xia2 |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.660 | 1.318 |
High resolution limit [Å] | 1.270 | 1.270 |
Rmerge | 0.089 | 2.497 |
Rmeas | 0.092 | 2.565 |
Rpim | 0.020 | 0.585 |
Number of reflections | 93285 | 9281 |
<I/σ(I)> | 21.27 | 1.28 |
Completeness [%] | 99.9 | 99.66 |
Redundancy | 19.9 | 19.1 |
CC(1/2) | 1.000 | 0.513 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 21% PEG 3350, 250mM NaCl, 100mM Tris, pH 8.2 |