7P0V
Crystal structure of human SF3A1 ubiquitin-like domain in complex with U1 snRNA stem-loop 4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.999987 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 42.993, 62.722, 138.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.050 - 1.560 |
R-factor | 0.2198 |
Rwork | 0.218 |
R-free | 0.25790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zkh |
RMSD bond length | 0.007 |
RMSD bond angle | 0.861 |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.050 | 1.620 |
High resolution limit [Å] | 1.560 | 1.560 |
Number of reflections | 26828 | 4256 |
<I/σ(I)> | 21.73 | |
Completeness [%] | 99.0 | |
Redundancy | 13.3 | |
CC(1/2) | 1.000 | 0.555 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 100 mM Tris-HCl pH 8.5, 200 mM Li2SO4 and 40 % PEG400 |